CDS

Accession Number TCMCG057C36976
gbkey CDS
Protein Id XP_018437604.1
Location join(48291729..48291833,48291985..48292040,48292236..48292303,48292394..48292446,48292532..48292585,48292669..48292731,48292834..48292886,48292971..48293252,48293344..48293392,48293483..48293566,48293680..48293759,48293867..48293953,48294038..48294437)
Gene LOC108809972
GeneID 108809972
Organism Raphanus sativus

Protein

Length 477aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018582102.1
Definition PREDICTED: polycomb group protein VERNALIZATION 2-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description chromatin DNA binding
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11463        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000122        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0000803        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0000977        [VIEW IN EMBL-EBI]
GO:0000978        [VIEW IN EMBL-EBI]
GO:0000987        [VIEW IN EMBL-EBI]
GO:0001012        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001739        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001818        [VIEW IN EMBL-EBI]
GO:0001932        [VIEW IN EMBL-EBI]
GO:0001933        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005720        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0008276        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0008285        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010563        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016574        [VIEW IN EMBL-EBI]
GO:0016586        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0031490        [VIEW IN EMBL-EBI]
GO:0031519        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032642        [VIEW IN EMBL-EBI]
GO:0032682        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0032993        [VIEW IN EMBL-EBI]
GO:0034708        [VIEW IN EMBL-EBI]
GO:0034968        [VIEW IN EMBL-EBI]
GO:0035064        [VIEW IN EMBL-EBI]
GO:0035097        [VIEW IN EMBL-EBI]
GO:0035098        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042054        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042325        [VIEW IN EMBL-EBI]
GO:0042326        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0042509        [VIEW IN EMBL-EBI]
GO:0042532        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045596        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045936        [VIEW IN EMBL-EBI]
GO:0046425        [VIEW IN EMBL-EBI]
GO:0046426        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050678        [VIEW IN EMBL-EBI]
GO:0050680        [VIEW IN EMBL-EBI]
GO:0050730        [VIEW IN EMBL-EBI]
GO:0050732        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070316        [VIEW IN EMBL-EBI]
GO:0070317        [VIEW IN EMBL-EBI]
GO:0070603        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070734        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098532        [VIEW IN EMBL-EBI]
GO:0140030        [VIEW IN EMBL-EBI]
GO:0140034        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902532        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1904892        [VIEW IN EMBL-EBI]
GO:1904893        [VIEW IN EMBL-EBI]
GO:1904949        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:1990841        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001228        [VIEW IN EMBL-EBI]
GO:2001229        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGGCGTTAGACCCTTAACGGAGGAGGAAAAGGAACTTATATCATTATTTGGCAAACCTGATACCGTATACTATTATCTTCAAGCTTTCACACGAGACAGGCCACGTTTGCTTCCAAGATGTTTGAGCTACAAAATACAAGCGAGGAAAAATAAGATGGCAAATCCAGGTGGAGTATCAATTTTTAACTTTATGAATTGTAATAACATAATACTGAAATCCCAAGTTGTGAAAAAGACTTCTTGCCCATTTTGCCCAATGAAATGTGGAAGCCTCAAGGGCGTGAAACATCATTTGACATCATCGCATGATTTATATGACTTTAACTTTCGGTTGTCGGAGAATGGTCATCGGAATTTTGATGTGTCCGTGAAACCTGATGCATTCGAAAATGGGATACTATATAATGATTTAGAGAGGCACCATCTTGTTAATTACACCTGTTATCGCTTGAAATCCCGTATGCGAGGCCAAGTATATGGTCCTAAGCGACGTAAATTTTGTGAGATTTTTGAGAAGTATTCAGACGAAGTCCCTCGTGACAAAGCAAATGATCAATTGCCTCAAGAGAACGGTAATATCTCATCCTCCCTAGCAATAACTCGCTTGTCGGAAGAGACTAGCGACATTCAGACGATAACTCAACCAGAAATAGGTCAGTGTCCTAAAGCTAAGGGGCCTCGTGCTACTGGGAGAAAAAAGTTAAATCCAGAGCGGGTCCAGGCTGAAAGTACCGATCTTCTTAGGAGTCGGCAGTACTATCACTCTAAAACATTACAGCCAATGACTCTGGAAGAAGTACTGTCTGATGCGGACAGTGATGATGAACAAGATGAAGAATTCAAAGATTTTCTAGAACGCCTGAAACTTGATCGGTTGGAGGATGCGACCGATGATGAGAAGAGATTTATGTGGCTTTGGAACACATTCATGAGAAAGCAAAATGTGTTCGTGGAAAGACATATGCATTGGGCATGTGAAGAGTTCGTAAAAGTTCATGCGAAAGAGCTGATCACTCCTCAACTTATCTGGCTCTGGAGACTGTTTGCAATTGATATACTGTGTTTAAGATACGGTCTGATAAACGCCAAGACCATGGACAAATGCAGTATCATCCTCCAGAAAGCACAGGAAGAAAAAGAAGCACCAGAAGAAGCGGCGAGAGCAGCAGAACTGGAGGCAGCAGCAGACGCGGAGGCAGCAGAAGAAGAAGCGGAGGCAGCAGAGGCGGCAAAAGCGGCAGCAGCCGCGGCAAAAGCAGCAGCAGCAGCGGCAAAAGCCGCAGCAGCAGCAGCATCCGCCTGTAAAGCCACAAGAAGAAGCACGAGAACACAGAACAAGAAGAAGAAACAAGAAGCAGCAGCCACCTCTAAAGCTAATTCTAATGGCAACGAGCCACAACCTATGGAACTTGATGAAGAAGAACATTAG
Protein:  
MAGVRPLTEEEKELISLFGKPDTVYYYLQAFTRDRPRLLPRCLSYKIQARKNKMANPGGVSIFNFMNCNNIILKSQVVKKTSCPFCPMKCGSLKGVKHHLTSSHDLYDFNFRLSENGHRNFDVSVKPDAFENGILYNDLERHHLVNYTCYRLKSRMRGQVYGPKRRKFCEIFEKYSDEVPRDKANDQLPQENGNISSSLAITRLSEETSDIQTITQPEIGQCPKAKGPRATGRKKLNPERVQAESTDLLRSRQYYHSKTLQPMTLEEVLSDADSDDEQDEEFKDFLERLKLDRLEDATDDEKRFMWLWNTFMRKQNVFVERHMHWACEEFVKVHAKELITPQLIWLWRLFAIDILCLRYGLINAKTMDKCSIILQKAQEEKEAPEEAARAAELEAAADAEAAEEEAEAAEAAKAAAAAAKAAAAAAKAAAAAASACKATRRSTRTQNKKKKQEAAATSKANSNGNEPQPMELDEEEH